Laboratory of Bioinformatics Analyses for Genomics and Metabolism
We are happy to announce the publication of PANORAMA, a new computational tool developed by our team, in PLOS Computational Biology. It has been developed during the PhD thesis of Jérôme Arnoux. Why PANORAMA? Over the past decade, the explosion
MUDIS4LS project (ESR+/EquipEx PIA3) is leaded by the French Institute of Bioinformatics (IFB). It is based on 4 technological workpackages and 5 thematic projects (Implementation Studies). It gathers 39 teams from 14 organisations, 4 national data centers, 7 regional data
Funded by the French Priority Plan on antibioresistance, the ABRomics project aims at developing an online community-driven platform to scale up and improve surveillance and research on antibiotic resistance from a One Health perspective. The platform is made of: The
PPanGGOLiN (Gautreau et al. 2020) is a software suite used to create and manipulate prokaryotic pangenomes from a set of either genomic DNA sequences or provided genome annotations. It is designed to scale up to tens of thousands of genomes.
Horizontal gene transfer (HGT) is a major source of variability in prokaryotic genomes. Regions of Genome Plasticity (RGPs) are clusters of genes located in highly variable genomic regions. Most of them arise from HGT and correspond to Genomic Islands (GIs).
We are happy to announce the publication of PANORAMA, a new computational tool developed by our team, in PLOS Computational Biology. It has been developed during the PhD thesis of Jérôme Arnoux. Why PANORAMA? Over the past decade, the explosion
The MicroScope team was delighted to present a poster at JOBIM 2026, giving a comprehensive overview of the MicroScope platform and highlighting its latest developments. JOBIM (Journées Ouvertes en Biologie, Informatique et Mathématiques), held this year in Strasbourg, France, is