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Moulin, L; Avarre, Jean-Christophe; Jaubert, Marianne; Barbe, Valérie; Béna, Gilles; Cartiaux, F; Delajudie, P; Dreyfus, Bernard; Elmerich, D; Fardoux, Joël; others,
Abscence de gènes nod chez certaines souches de# Bradyrhizobium# photosynthétiques révélée par l'analyse de la séquence de leurs génomes Journal Article
In: 2006.
@article{moulin2006abscence,
title = {Abscence de gènes nod chez certaines souches de# Bradyrhizobium# photosynthétiques révélée par l'analyse de la séquence de leurs génomes},
author = {L Moulin and Jean-Christophe Avarre and Marianne Jaubert and Valérie Barbe and Gilles Béna and F Cartiaux and P Delajudie and Bernard Dreyfus and D Elmerich and Joël Fardoux and others},
year = {2006},
date = {2006-01-01},
publisher = {INRA},
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tppubtype = {article}
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Thiberge, JM; Lehours, P; Bouchier, C; Ma, L; Creno, S; Medigue, C; Vallenet, D; Ecobichon, C; Boursaux-eude, C; Labigne, A
Sequence of the First Helicobacter pylori Strains Involved in Low-grade Gastric Mucosa-associated Lymphoid Tissue (malt) Lymphoma Journal Article
In: Helicobacter, vol. 11, no. 4, pp. 324, 2006.
@article{thiberge2006sequence,
title = {Sequence of the First Helicobacter pylori Strains Involved in Low-grade Gastric Mucosa-associated Lymphoid Tissue (malt) Lymphoma},
author = {JM Thiberge and P Lehours and C Bouchier and L Ma and S Creno and C Medigue and D Vallenet and C Ecobichon and C Boursaux-eude and A Labigne},
year = {2006},
date = {2006-01-01},
journal = {Helicobacter},
volume = {11},
number = {4},
pages = {324},
keywords = {},
pubstate = {published},
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Fournier, Pierre-Edouard; Vallenet, David; Barbe, Valérie; Audic, Stéphane; Ogata, Hiroyuki; Poirel, Laurent; Richet, Hervé; Robert, Catherine; Mangenot, Sophie; Abergel, Chantal; others,
Comparative genomics of multidrug resistance in Acinetobacter baumannii Journal Article
In: PLoS genetics, vol. 2, no. 1, pp. e7, 2006.
@article{fournier2006comparative,
title = {Comparative genomics of multidrug resistance in Acinetobacter baumannii},
author = {Pierre-Edouard Fournier and David Vallenet and Valérie Barbe and Stéphane Audic and Hiroyuki Ogata and Laurent Poirel and Hervé Richet and Catherine Robert and Sophie Mangenot and Chantal Abergel and others},
year = {2006},
date = {2006-01-01},
journal = {PLoS genetics},
volume = {2},
number = {1},
pages = {e7},
publisher = {Public Library of Science},
keywords = {},
pubstate = {published},
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2005
Siroy, Axel; Molle, Virginie; Lemaître-Guillier, Christelle; Vallenet, David; Pestel-Caron, Martine; Cozzone, Alain J; Jouenne, Thierry; Dé, Emmanuelle
Channel formation by CarO, the carbapenem resistance-associated outer membrane protein of Acinetobacter baumannii Journal Article
In: Antimicrobial agents and chemotherapy, vol. 49, no. 12, pp. 4876–4883, 2005.
@article{siroy2005channel,
title = {Channel formation by CarO, the carbapenem resistance-associated outer membrane protein of Acinetobacter baumannii},
author = {Axel Siroy and Virginie Molle and Christelle Lemaître-Guillier and David Vallenet and Martine Pestel-Caron and Alain J Cozzone and Thierry Jouenne and Emmanuelle Dé},
year = {2005},
date = {2005-01-01},
journal = {Antimicrobial agents and chemotherapy},
volume = {49},
number = {12},
pages = {4876–4883},
publisher = {American Society for Microbiology},
keywords = {},
pubstate = {published},
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Médigue, Claudine; Krin, Evelyne; Pascal, Géraldine; Barbe, Valérie; Bernsel, Andreas; Bertin, Philippe N; Cheung, Frankie; Cruveiller, Stéphane; D'Amico, Salvino; Duilio, Angela; others,
Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125 Journal Article
In: Genome research, vol. 15, no. 10, pp. 1325–1335, 2005.
@article{medigue2005coping,
title = {Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125},
author = {Claudine Médigue and Evelyne Krin and Géraldine Pascal and Valérie Barbe and Andreas Bernsel and Philippe N Bertin and Frankie Cheung and Stéphane Cruveiller and Salvino D'Amico and Angela Duilio and others},
year = {2005},
date = {2005-01-01},
journal = {Genome research},
volume = {15},
number = {10},
pages = {1325–1335},
publisher = {Cold Spring Harbor Lab},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
Calteau, Alexandra; Gouy, Manolo; Perrière, Guy
Horizontal transfer of two operons coding for hydrogenases between bacteria and archaea Journal Article
In: Journal of molecular evolution, vol. 60, no. 5, pp. 557–565, 2005.
@article{calteau2005horizontal,
title = {Horizontal transfer of two operons coding for hydrogenases between bacteria and archaea},
author = {Alexandra Calteau and Manolo Gouy and Guy Perrière},
year = {2005},
date = {2005-01-01},
journal = {Journal of molecular evolution},
volume = {60},
number = {5},
pages = {557–565},
publisher = {Springer},
keywords = {},
pubstate = {published},
tppubtype = {article}
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MEDIGUE, Claudine
L'annotation des génomes bactériens: Bioinformatique et génome Journal Article
In: Biofutur, vol. 251, pp. 23–27, 2005.
@article{medigue2005annotation,
title = {L'annotation des génomes bactériens: Bioinformatique et génome},
author = {Claudine MEDIGUE},
year = {2005},
date = {2005-01-01},
journal = {Biofutur},
volume = {251},
pages = {23–27},
publisher = {Lavoisier},
keywords = {},
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Pascal, Géraldine; Médigue, Claudine; Danchin, Antoine
Universal biases in protein composition of model prokaryotes Journal Article
In: Proteins: Structure, Function, and Bioinformatics, vol. 60, no. 1, pp. 27–35, 2005.
@article{pascal2005universal,
title = {Universal biases in protein composition of model prokaryotes},
author = {Géraldine Pascal and Claudine Médigue and Antoine Danchin},
year = {2005},
date = {2005-01-01},
journal = {Proteins: Structure, Function, and Bioinformatics},
volume = {60},
number = {1},
pages = {27–35},
publisher = {Wiley Online Library},
keywords = {},
pubstate = {published},
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Medigue, C
Bioinformatique et genome-L'annotation des genomes bacteriens Journal Article
In: Biofutur, no. 251, pp. 19, 2005.
@article{medigue2005bioinformatique,
title = {Bioinformatique et genome-L'annotation des genomes bacteriens},
author = {C Medigue},
year = {2005},
date = {2005-01-01},
journal = {Biofutur},
number = {251},
pages = {19},
publisher = {Paris: Biofutur, 1982-},
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Cruveiller, Stephane; Saux, Jeroˆme Le; Vallenet, David; Lajus, Aurelie; Bocs, Stephanie; Medigue, Claudine
MICheck: a web tool for fast checking of syntactic annotations of bacterial genomes Journal Article
In: Nucleic acids research, vol. 33, no. suppl_2, pp. W471–W479, 2005.
@article{cruveiller2005micheck,
title = {MICheck: a web tool for fast checking of syntactic annotations of bacterial genomes},
author = {Stephane Cruveiller and Jeroˆme Le Saux and David Vallenet and Aurelie Lajus and Stephanie Bocs and Claudine Medigue},
year = {2005},
date = {2005-01-01},
journal = {Nucleic acids research},
volume = {33},
number = {suppl_2},
pages = {W471–W479},
publisher = {Oxford University Press},
keywords = {},
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2004
Chain, Patrick SG; Carniel, E; Larimer, Frank W; Lamerdin, Jane; Stoutland, PO; Regala, WM; Georgescu, AM; Vergez, LM; Land, ML; Motin, VL; others,
Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis Journal Article
In: Proceedings of the National Academy of Sciences, vol. 101, no. 38, pp. 13826–13831, 2004.
@article{chain2004insights,
title = {Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis},
author = {Patrick SG Chain and E Carniel and Frank W Larimer and Jane Lamerdin and PO Stoutland and WM Regala and AM Georgescu and LM Vergez and ML Land and VL Motin and others},
year = {2004},
date = {2004-01-01},
journal = {Proceedings of the National Academy of Sciences},
volume = {101},
number = {38},
pages = {13826–13831},
publisher = {National Academy of Sciences},
keywords = {},
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Jabbari, Kamel; Cruveiller, Stephane; Clay, Oliver; Saux, Jérôme Le; Bernardi, Giorgio
The new genes of rice: a closer look Journal Article
In: Trends in plant science, vol. 9, no. 6, pp. 281–285, 2004.
@article{jabbari2004new,
title = {The new genes of rice: a closer look},
author = {Kamel Jabbari and Stephane Cruveiller and Oliver Clay and Jérôme Le Saux and Giorgio Bernardi},
year = {2004},
date = {2004-01-01},
journal = {Trends in plant science},
volume = {9},
number = {6},
pages = {281–285},
publisher = {Elsevier},
keywords = {},
pubstate = {published},
tppubtype = {article}
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Cruveiller, Stéphane; Jabbari, Kamel; Clay, Oliver; Bernardi, Giorgio
Compositional gene landscapes in vertebrates Journal Article
In: Genome research, vol. 14, no. 5, pp. 886–892, 2004.
@article{cruveiller2004compositional,
title = {Compositional gene landscapes in vertebrates},
author = {Stéphane Cruveiller and Kamel Jabbari and Oliver Clay and Giorgio Bernardi},
year = {2004},
date = {2004-01-01},
journal = {Genome research},
volume = {14},
number = {5},
pages = {886–892},
publisher = {Cold Spring Harbor Lab},
keywords = {},
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Calteau, Alexandra; Daubin, Vincent; Perrieère, Guy
Super-tree approach for studying the phylogeny of prokaryotes: New results on completely sequenced genomes Proceedings Article
In: International Conference on Computational Science, pp. 700–708, Springer 2004.
@inproceedings{calteau2004super,
title = {Super-tree approach for studying the phylogeny of prokaryotes: New results on completely sequenced genomes},
author = {Alexandra Calteau and Vincent Daubin and Guy Perrieère},
year = {2004},
date = {2004-01-01},
booktitle = {International Conference on Computational Science},
pages = {700–708},
organization = {Springer},
keywords = {},
pubstate = {published},
tppubtype = {inproceedings}
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Alvarez-Valin, Fernando; Clay, Oliver; Cruveiller, Stéphane; Bernardi, Giorgio
Inaccurate reconstruction of ancestral GC levels creates a “vanishing isochores” effect Journal Article
In: Molecular phylogenetics and evolution, vol. 31, no. 2, pp. 788–793, 2004.
@article{alvarez2004inaccurate,
title = {Inaccurate reconstruction of ancestral GC levels creates a “vanishing isochores” effect},
author = {Fernando Alvarez-Valin and Oliver Clay and Stéphane Cruveiller and Giorgio Bernardi},
year = {2004},
date = {2004-01-01},
journal = {Molecular phylogenetics and evolution},
volume = {31},
number = {2},
pages = {788–793},
publisher = {Elsevier},
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pubstate = {published},
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Barbe, Valerie; Vallenet, David; Fonknechten, Nuria; Kreimeyer, Annett; Oztas, Sophie; Labarre, Laurent; Cruveiller, Stephane; Robert, Catherine; Duprat, Simone; Wincker, Patrick; others,
Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium Journal Article
In: Nucleic Acids Research, vol. 32, no. 19, pp. 5766–5779, 2004.
@article{barbe2004unique,
title = {Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium},
author = {Valerie Barbe and David Vallenet and Nuria Fonknechten and Annett Kreimeyer and Sophie Oztas and Laurent Labarre and Stephane Cruveiller and Catherine Robert and Simone Duprat and Patrick Wincker and others},
year = {2004},
date = {2004-01-01},
journal = {Nucleic Acids Research},
volume = {32},
number = {19},
pages = {5766–5779},
publisher = {Oxford University Press},
keywords = {},
pubstate = {published},
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Cruveiller, Stéphane; Jabbari, Kamel; Clay, Oliver; Bernardi, Giorgio
Incorrectly predicted genes in rice? Journal Article
In: Gene, vol. 333, pp. 187–188, 2004.
@article{cruveiller2004incorrectly,
title = {Incorrectly predicted genes in rice?},
author = {Stéphane Cruveiller and Kamel Jabbari and Oliver Clay and Giorgio Bernardi},
year = {2004},
date = {2004-01-01},
journal = {Gene},
volume = {333},
pages = {187–188},
publisher = {Elsevier},
keywords = {},
pubstate = {published},
tppubtype = {article}
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Calteau, A; Daubin, V; Perrieere, G
Part IV-Workshop on Gene, Genome, and Population Evolution-Super-tree Approach for Studying the Phylogeny of Prokaryotes: New Results on Completely Sequenced Genomes Journal Article
In: Lecture Notes in Computer Science, vol. 3036, pp. 700–700, 2004.
@article{calteau2004part,
title = {Part IV-Workshop on Gene, Genome, and Population Evolution-Super-tree Approach for Studying the Phylogeny of Prokaryotes: New Results on Completely Sequenced Genomes},
author = {A Calteau and V Daubin and G Perrieere},
year = {2004},
date = {2004-01-01},
journal = {Lecture Notes in Computer Science},
volume = {3036},
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publisher = {Berlin: Springer-Verlag, 1973-},
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2003
Bénit, Laurence; Calteau, Alexandra; Heidmann, Thierry
Characterization of the low-copy HERV-Fc family: evidence for recent integrations in primates of elements with coding envelope genes Journal Article
In: Virology, vol. 312, no. 1, pp. 159–168, 2003.
@article{benit2003characterization,
title = {Characterization of the low-copy HERV-Fc family: evidence for recent integrations in primates of elements with coding envelope genes},
author = {Laurence Bénit and Alexandra Calteau and Thierry Heidmann},
year = {2003},
date = {2003-01-01},
journal = {Virology},
volume = {312},
number = {1},
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Duchaud, Eric; Rusniok, Christophe; Frangeul, Lionel; Buchrieser, Carmen; Givaudan, Alain; Taourit, Séad; Bocs, Stéphanie; Boursaux-Eude, Caroline; Chandler, Michael; Charles, Jean-François; others,
The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens Journal Article
In: Nature biotechnology, vol. 21, no. 11, pp. 1307–1313, 2003.
@article{duchaud2003genome,
title = {The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens},
author = {Eric Duchaud and Christophe Rusniok and Lionel Frangeul and Carmen Buchrieser and Alain Givaudan and Séad Taourit and Stéphanie Bocs and Caroline Boursaux-Eude and Michael Chandler and Jean-François Charles and others},
year = {2003},
date = {2003-01-01},
journal = {Nature biotechnology},
volume = {21},
number = {11},
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Cruveiller, Stéphane; Jabbari, Kamel; Clay, Oliver; Bernardi, Giorgio
Compositional features of eukaryotic genomes for checking predicted genes Journal Article
In: Briefings in bioinformatics, vol. 4, no. 1, pp. 43–52, 2003.
@article{cruveiller2003compositional,
title = {Compositional features of eukaryotic genomes for checking predicted genes},
author = {Stéphane Cruveiller and Kamel Jabbari and Oliver Clay and Giorgio Bernardi},
year = {2003},
date = {2003-01-01},
journal = {Briefings in bioinformatics},
volume = {4},
number = {1},
pages = {43–52},
publisher = {Henry Stewart Publications},
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pubstate = {published},
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Jabbari, Kamel; Cruveiller, Stéphane; Clay, Oliver; Bernardi, Giorgio
The correlation between GC 3 and hydropathy in human genes Journal Article
In: Gene, vol. 317, pp. 137–140, 2003.
@article{jabbari2003correlation,
title = {The correlation between GC 3 and hydropathy in human genes},
author = {Kamel Jabbari and Stéphane Cruveiller and Oliver Clay and Giorgio Bernardi},
year = {2003},
date = {2003-01-01},
journal = {Gene},
volume = {317},
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Durand, Patrick; Médigue, Claudine; Morgat, Anne; Vandenbrouck, Yves; Viari, Alain; Rechenmann, François
Integration of data and methods for genome analysis. Journal Article
In: Current opinion in drug discovery & development, vol. 6, no. 3, pp. 346–352, 2003.
@article{durand2003integration,
title = {Integration of data and methods for genome analysis.},
author = {Patrick Durand and Claudine Médigue and Anne Morgat and Yves Vandenbrouck and Alain Viari and François Rechenmann},
year = {2003},
date = {2003-01-01},
journal = {Current opinion in drug discovery & development},
volume = {6},
number = {3},
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Yuen, Kwok-yung; Pascal, Géraldine; Wong, Samson SY; Glaser, Philippe; Woo, Patrick CY; Kunst, Frank; Cai, James J; Cheung, Elim YL; Médigue, Claudine; Danchin, Antoine
Exploring the Penicillium marneffei genome Journal Article
In: Archives of microbiology, vol. 179, no. 5, pp. 339–353, 2003.
@article{yuen2003exploring,
title = {Exploring the Penicillium marneffei genome},
author = {Kwok-yung Yuen and Géraldine Pascal and Samson SY Wong and Philippe Glaser and Patrick CY Woo and Frank Kunst and James J Cai and Elim YL Cheung and Claudine Médigue and Antoine Danchin},
year = {2003},
date = {2003-01-01},
journal = {Archives of microbiology},
volume = {179},
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Bocs, Stephanie; Cruveiller, Stephane; Vallenet, David; Nuel, Gregory; Medigue, Claudine
AMIGene: annotation of microbial genes Journal Article
In: Nucleic Acids Research, vol. 31, no. 13, pp. 3723–3726, 2003.
@article{bocs2003amigene,
title = {AMIGene: annotation of microbial genes},
author = {Stephanie Bocs and Stephane Cruveiller and David Vallenet and Gregory Nuel and Claudine Medigue},
year = {2003},
date = {2003-01-01},
journal = {Nucleic Acids Research},
volume = {31},
number = {13},
pages = {3723–3726},
publisher = {Oxford University Press},
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pubstate = {published},
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2002
Camus, Jean-Christophe; Pryor, Melinda J; Médigue, Claudine; Cole, Stewart T
Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv Journal Article
In: Microbiology, vol. 148, no. 10, pp. 2967–2973, 2002.
@article{camus2002re,
title = {Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv},
author = {Jean-Christophe Camus and Melinda J Pryor and Claudine Médigue and Stewart T Cole},
year = {2002},
date = {2002-01-01},
journal = {Microbiology},
volume = {148},
number = {10},
pages = {2967–2973},
publisher = {Microbiology Society},
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Médigue, Claudine; Bocs, Stéphanie; Labarre, Laurent; Mathé, Catherine; Vallenet, David
L’annotation in silico des séquences génomiques-Bio-informatique (1) Journal Article
In: médecine/sciences, vol. 18, no. 2, pp. 237–250, 2002.
@article{medigue2002annotation,
title = {L’annotation in silico des séquences génomiques-Bio-informatique (1)},
author = {Claudine Médigue and Stéphanie Bocs and Laurent Labarre and Catherine Mathé and David Vallenet},
year = {2002},
date = {2002-01-01},
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Medigue, Claudine; Bocs, Stephane; Labarre, Laurent; Mathe, Catherine; Vallenet, David
Bio-informatics (1)-In silico annotation of genomic sequences Journal Article
In: M S-MEDECINE SCIENCES, vol. 18, no. 2, pp. 237–250, 2002.
@article{medigue2002bio,
title = {Bio-informatics (1)-In silico annotation of genomic sequences},
author = {Claudine Medigue and Stephane Bocs and Laurent Labarre and Catherine Mathe and David Vallenet},
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Bocs, Stéphanie; Danchin, Antoine; Médigue, Claudine
Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes Journal Article
In: BMC bioinformatics, vol. 3, no. 1, pp. 5, 2002.
@article{bocs2002re,
title = {Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes},
author = {Stéphanie Bocs and Antoine Danchin and Claudine Médigue},
year = {2002},
date = {2002-01-01},
journal = {BMC bioinformatics},
volume = {3},
number = {1},
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Médigue, Claudine; Wong, Benjamin Chun-Yu; Lin, Marie Chia-Mi; Bocs, Stéphanie; Danchin, Antoine
The secE gene of Helicobacter pylori Journal Article
In: Journal of bacteriology, vol. 184, no. 10, pp. 2837–2840, 2002.
@article{medigue2002sece,
title = {The secE gene of Helicobacter pylori},
author = {Claudine Médigue and Benjamin Chun-Yu Wong and Marie Chia-Mi Lin and Stéphanie Bocs and Antoine Danchin},
year = {2002},
date = {2002-01-01},
journal = {Journal of bacteriology},
volume = {184},
number = {10},
pages = {2837–2840},
publisher = {Am Soc Microbiol},
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}
2001
Musto, Héctor; Cruveiller, Stéphane; D'Onofrio, Giuseppe; Romero, Héctor; Bernardi, Giorgio
Translational selection on codon usage in Xenopus laevis Journal Article
In: Molecular biology and evolution, vol. 18, no. 9, pp. 1703–1707, 2001.
@article{musto2001translational,
title = {Translational selection on codon usage in Xenopus laevis},
author = {Héctor Musto and Stéphane Cruveiller and Giuseppe D'Onofrio and Héctor Romero and Giorgio Bernardi},
year = {2001},
date = {2001-01-01},
journal = {Molecular biology and evolution},
volume = {18},
number = {9},
pages = {1703–1707},
publisher = {Oxford University Press},
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2000
Cruveiller, Stéphane; D'Onofrio, Giuseppe; Bernardi, Giorgio
The compositional transition between the genomes of cold-and warm-blooded vertebrates: codon frequencies in orthologous genes Journal Article
In: Gene, vol. 261, no. 1, pp. 71–83, 2000.
@article{cruveiller2000compositional,
title = {The compositional transition between the genomes of cold-and warm-blooded vertebrates: codon frequencies in orthologous genes},
author = {Stéphane Cruveiller and Giuseppe D'Onofrio and Giorgio Bernardi},
year = {2000},
date = {2000-01-01},
journal = {Gene},
volume = {261},
number = {1},
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1999
Cruveiller, S; Jabbari, K; D'Onofrio, G; Bernardi, G
Different hydrophobicities of orthologous proteins from Xenopus and human Journal Article
In: Gene, vol. 238, no. 1, pp. 15–21, 1999.
@article{cruveiller1999different,
title = {Different hydrophobicities of orthologous proteins from Xenopus and human},
author = {S Cruveiller and K Jabbari and G D'Onofrio and G Bernardi},
year = {1999},
date = {1999-01-01},
journal = {Gene},
volume = {238},
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Médigue, Claudine; Rose, Matthias; Viari, Alain; Danchin, Antoine
Detecting and analyzing DNA sequencing errors: toward a higher quality of the Bacillus subtilis genome sequence Journal Article
In: Genome research, vol. 9, no. 11, pp. 1116–1127, 1999.
@article{medigue1999detecting,
title = {Detecting and analyzing DNA sequencing errors: toward a higher quality of the Bacillus subtilis genome sequence},
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D'onofrio, Giuseppe; Jabbari, Kamel; Musto, Hector; ALVAREZ-VALIN, FERNANDO; Cruveiller, Stephane; Bernardi, Giorgio
Evolutionary genomics of vertebrates and its implications Journal Article
In: Annals of the New York Academy of Sciences, vol. 870, no. 1, pp. 81–94, 1999.
@article{d1999evolutionary,
title = {Evolutionary genomics of vertebrates and its implications},
author = {Giuseppe D'onofrio and Kamel Jabbari and Hector Musto and FERNANDO ALVAREZ-VALIN and Stephane Cruveiller and Giorgio Bernardi},
year = {1999},
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Médigue, C; Rechenmann, François; Danchin, Antoine; Viari, Alain
Imagene: an integrated computer environment for sequence annotation and analysis. Journal Article
In: Bioinformatics (Oxford, England), vol. 15, no. 1, pp. 2–15, 1999.
@article{medigue1999imagene,
title = {Imagene: an integrated computer environment for sequence annotation and analysis.},
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1998
Danchin, Antoine; Médigue, Claudine; Rechenmann, François
Integrated Genome Informatics Journal Article
In: Bacterial Genomes: Physical Structure and Analysis, pp. 567–582, 1998.
@article{danchin1998integrated,
title = {Integrated Genome Informatics},
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year = {1998},
date = {1998-01-01},
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1997
Kunst, F; Ogasawara, N; Moszer, I; Albertini, AM; Alloni, GO; Azevedo, V; Bertero, MG; Bessieres, P; Bolotin, A; Borchert, Sea; others,
The complete genome sequence of the gram-positive bacterium Bacillus subtilis Journal Article
In: Nature, vol. 390, no. 6657, pp. 249, 1997.
@article{kunst1997complete,
title = {The complete genome sequence of the gram-positive bacterium Bacillus subtilis},
author = {F Kunst and N Ogasawara and I Moszer and AM Albertini and GO Alloni and V Azevedo and MG Bertero and P Bessieres and A Bolotin and Sea Borchert and others},
year = {1997},
date = {1997-01-01},
journal = {Nature},
volume = {390},
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1995
Médigue, C; Moszer, I; Viari, A; Danchin, A
Analysis of a Bacillus subtilis genome fragment using a co-operative computer system prototype Journal Article
In: Gene, vol. 165, no. 1, pp. GC37–GC51, 1995.
@article{medigue1995analysis,
title = {Analysis of a Bacillus subtilis genome fragment using a co-operative computer system prototype},
author = {C Médigue and I Moszer and A Viari and A Danchin},
year = {1995},
date = {1995-01-01},
journal = {Gene},
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Médigue, Claudine; Vermat, Thierry; Bisson, Gilles; Viari, Alain; Danchin, Antoine
Cooperative Computer System For Genome Sequence Analysis. Proceedings Article
In: Ismb, pp. 249–258, 1995.
@inproceedings{medigue1995cooperative,
title = {Cooperative Computer System For Genome Sequence Analysis.},
author = {Claudine Médigue and Thierry Vermat and Gilles Bisson and Alain Viari and Antoine Danchin},
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date = {1995-01-01},
booktitle = {Ismb},
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Borodovsky, Mark; Mclninch, James D; Koonin, Eugene V; Rudd, Kenneth E; Médigue, Claudine; Danchin, Antoine
Detection of new genes in a bacterial genome using Markov models for three gene classes Journal Article
In: Nucleic acids research, vol. 23, no. 17, pp. 3554–3562, 1995.
@article{borodovsky1995detection,
title = {Detection of new genes in a bacterial genome using Markov models for three gene classes},
author = {Mark Borodovsky and James D Mclninch and Eugene V Koonin and Kenneth E Rudd and Claudine Médigue and Antoine Danchin},
year = {1995},
date = {1995-01-01},
journal = {Nucleic acids research},
volume = {23},
number = {17},
pages = {3554–3562},
publisher = {Oxford University Press},
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1993
Schmeltzer, Olivier; Médigue, Claudine; Uvietta, P; Rechenmann, François; Dorkeld, Frank; Perrière, Guy; Gautier, Christian
Building large knowledge bases in molecular biology. Proceedings Article
In: Proceedings. International Conference on Intelligent Systems for Molecular Biology, pp. 345–353, 1993.
@inproceedings{schmeltzer1993building,
title = {Building large knowledge bases in molecular biology.},
author = {Olivier Schmeltzer and Claudine Médigue and P Uvietta and François Rechenmann and Frank Dorkeld and Guy Perrière and Christian Gautier},
year = {1993},
date = {1993-01-01},
booktitle = {Proceedings. International Conference on Intelligent Systems for Molecular Biology},
volume = {1},
pages = {345–353},
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Médigue, CLAUDINE; Viari, ALIIN; Henaut, A; Danchin, ANTOINE
Colibri: a functional data base for the Escherichia coli genome. Journal Article
In: Microbiology and Molecular Biology Reviews, vol. 57, no. 3, pp. 623–654, 1993.
@article{medigue1993colibri,
title = {Colibri: a functional data base for the Escherichia coli genome.},
author = {CLAUDINE Médigue and ALIIN Viari and A Henaut and ANTOINE Danchin},
year = {1993},
date = {1993-01-01},
journal = {Microbiology and Molecular Biology Reviews},
volume = {57},
number = {3},
pages = {623–654},
publisher = {American Society for Microbiology Journals},
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1991
Danchin, A; Médigue, C; Gascuel, O; Soldano, H; Hénaut, A
From data banks to data bases Journal Article
In: Research in microbiology, vol. 142, no. 7-8, pp. 913–916, 1991.
@article{danchin1991data,
title = {From data banks to data bases},
author = {A Danchin and C Médigue and O Gascuel and H Soldano and A Hénaut},
year = {1991},
date = {1991-01-01},
journal = {Research in microbiology},
volume = {142},
number = {7-8},
pages = {913–916},
publisher = {Elsevier},
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Médigue, C; Viari, A; Hénaut, A; Danchin, A
Escherichia coli molecular genetic map (1500 kbp): update II Journal Article
In: Molecular microbiology, vol. 5, no. 11, pp. 2629–2640, 1991.
@article{medigue1991escherichia,
title = {Escherichia coli molecular genetic map (1500 kbp): update II},
author = {C Médigue and A Viari and A Hénaut and A Danchin},
year = {1991},
date = {1991-01-01},
journal = {Molecular microbiology},
volume = {5},
number = {11},
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Médigue, Claudine
Conception et exploitation d'une base de donnees specialisee dediee a l'analyse du genome d'escherichia coli PhD Thesis
Paris 6, 1991.
@phdthesis{medigue1991conception,
title = {Conception et exploitation d'une base de donnees specialisee dediee a l'analyse du genome d'escherichia coli},
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Médigue, Claudine; Rouxel, Thierry; Vigier, Ph; Hénaut, Alain; Danchin, Antoine
Evidence for horizontal gene transfer in Escherichia coli speciation Journal Article
In: Journal of molecular biology, vol. 222, no. 4, pp. 851–856, 1991.
@article{medigue1991evidence,
title = {Evidence for horizontal gene transfer in Escherichia coli speciation},
author = {Claudine Médigue and Thierry Rouxel and Ph Vigier and Alain Hénaut and Antoine Danchin},
year = {1991},
date = {1991-01-01},
journal = {Journal of molecular biology},
volume = {222},
number = {4},
pages = {851–856},
publisher = {Elsevier},
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1990
Médigue, C; Bouché, JP; Hénaut, A; Danchin, A
Mapping of sequenced genes (700 kbp) in the restriction map of the Escherichia coli chromosome Journal Article
In: Molecular microbiology, vol. 4, no. 2, pp. 169–187, 1990.
@article{medigue1990mapping,
title = {Mapping of sequenced genes (700 kbp) in the restriction map of the Escherichia coli chromosome},
author = {C Médigue and JP Bouché and A Hénaut and A Danchin},
year = {1990},
date = {1990-01-01},
journal = {Molecular microbiology},
volume = {4},
number = {2},
pages = {169–187},
publisher = {Wiley Online Library},
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Médigue, C; Hénaut, A; Danchin, A
Escherichia coli molecular genetic map (1000Kbp): update Journal Article
In: Molecular microbiology, vol. 4, no. 9, pp. 1443–1454, 1990.
@article{medigue1990escherichia,
title = {Escherichia coli molecular genetic map (1000Kbp): update},
author = {C Médigue and A Hénaut and A Danchin},
year = {1990},
date = {1990-01-01},
journal = {Molecular microbiology},
volume = {4},
number = {9},
pages = {1443–1454},
publisher = {Wiley Online Library},
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pubstate = {published},
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}
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